Hmmm, that's odd. Let's start here: Firing order on the 258 6-cylinder is 1-5-3-6-2-4. The distributor rotates clockwise.
Start with where the #1 wire fits into the distributor cap and go around clockwise. The next wire should lead to the #5 plug, and so on.
You say the engine idles OK, so I don't think there's an intake leak. It couldn't hurt, however, to put a vacuum gauge on the fitting in the intake manifold. You will have to temporarily disconnect something, most likely the brake booster.
At idle it should read around 12 inches and remain steady. An unsteady or unusually low vacuum gauge indicates a bad engine valve or a vacuum leak.
These two conditions are common. When you have gone through these ideas post up with what you've found and let's go from there.